readinputs_from_csv

Functions

instantiate_compartments(inputs_path_file, ...)
set_interactions(compartments, connexions_path_file)
instantiateParticles_from_csv(compFile)
generate_particles_from_df(particles_df)	Generates a list of Particulates objects from a pandas DataFrame.
generate_system_species_list(...)

Module Contents

readinputs_from_csv.instantiate_compartments(inputs_path_file, compartment_types)

readinputs_from_csv.set_interactions(compartments, connexions_path_file)

readinputs_from_csv.instantiateParticles_from_csv(compFile)

readinputs_from_csv.generate_particles_from_df(particles_df)

Generates a list of Particulates objects from a pandas DataFrame.

readinputs_from_csv.generate_system_species_list(system_particle_object_list, MPforms_list, compartmentNames_list, boxNames_list)